Difference between revisions of "Biopython/C2/Manipulating-Sequences/Khasi"
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− | | 00:01 | + | | 00:01 Ngi pdiang sngewbha ia phi sha kane ka tutorial halor ka '''Manipulating Sequences.''' |
− | + | ||
− | + | ||
|- | |- | ||
− | | 00:06 | + | | 00:06 Ha kane ka tutorial, ngin pyndonkam ki tools ka '''Biopython''': Ban pynmih ia u random DNA sequence |
− | + | ||
− | + | ||
|- | |- | ||
| 00:13 | | 00:13 | ||
− | + | Phiah ia u DNA sequence ha ki jaka ba lah buh | |
− | + | ||
|- | |- | ||
| 00:17 | | 00:17 | ||
− | + | Pyndait lang ia artylli ki sequences ban pynlong kawei ka sequence ba thymmai | |
− | + | ||
|- | |- | ||
| 00:22 | | 00:22 | ||
− | + | Wad ia ka jingjrong jong ka sequence | |
− | + | ||
|- | |- | ||
| 00:26 | | 00:26 | ||
− | + | Niew ia ki number jong ki '''base''' lane ki dkhot jong u '''string''' | |
− | + | ||
|- | |- | ||
| 00:31 | | 00:31 | ||
− | + | Wad ia u base ba la thmu lane bynta jong u string | |
− | + | ||
|- | |- | ||
| 00:35 | | 00:35 | ||
− | + | Pynkylla ia ka '''sequence object''' sha ka mutable sequence object | |
− | + | ||
|- | |- | ||
| 00:40 | | 00:40 | ||
− | + | Ban bud ia kane ka tutorial, phi dei ban tip bha ia ka undergraduate Biochemistry lane Bioinformatics | |
− | + | ||
|- | |- | ||
| 00:47 | | 00:47 | ||
− | + | Bad ka basic Python programming | |
− | + | ||
|- | |- | ||
| 00:51 | | 00:51 | ||
− | + | Lada em, peit ia ki tutorials '''Python''' ha ka link ba la ai | |
− | + | ||
|- | |- | ||
| 00:56 | | 00:56 | ||
− | + | Ban record ia kane ka tutorial, nga pyndonkam da ka * '''Ubuntu OS''' version 14.10 | |
− | + | ||
|- | |- | ||
| 01:03 | | 01:03 | ||
− | + | '''Python''' version 2.7.8 | |
− | + | ||
|- | |- | ||
| 01:07 | | 01:07 | ||
− | + | '''Ipython interpreter''' version 2.3.0 | |
− | + | ||
|- | |- | ||
| 01:12 | | 01:12 | ||
− | + | '''Biopython''' version 1.64. | |
− | + | ||
|- | |- | ||
| 01:16 | | 01:16 | ||
− | + | To ngin ia plie iaka '''terminal''' bad sdang ia ka '''ipython interpreter''' | |
− | + | ||
|- | |- | ||
| 01:21 | | 01:21 | ||
− | + | Nion lang ia u '''Ctrl, Alt''' and '''t''' key | |
− | + | ||
|- | |- | ||
|01:26 | |01:26 | ||
− | + | Ha ka prompt, type: "ipython" bad sa nion '''Enter''' | |
− | + | ||
|- | |- | ||
| 01:31 | | 01:31 | ||
− | + | Ka '''Ipython''' prompt kan sa mih ha ka screen | |
− | + | ||
|- | |- | ||
| 01:35 | | 01:35 | ||
− | + | Da kaba pyndonkam ia ka Biopython, ngi lah ban pynmih ia ka '''sequence object''' na ka bynta ka random DNA sequence ha kano kano ka jingjrong | |
− | + | ||
|- | |- | ||
| 01:44 | | 01:44 | ||
− | + | To mynta ngin ia pynmih ia ka sequence object na ka bynta ka DNA sequence kaba 20 bases | |
− | + | ||
|- | |- | ||
|01:50 | |01:50 | ||
− | + | Ha ka prompt, type: "import random", bad nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 01:56 | | 01:56 | ||
− | + | Nangta, import '''Seq '''module na '''Bio '''package. | |
− | + | ||
|- | |- | ||
| 02:01 | | 02:01 | ||
− | + | Bunsien '''Seq''' ngi ju pronounce kum '''seek'''. | |
− | + | ||
|- | |- | ||
| 02:06 | | 02:06 | ||
− | + | Ha ka prompt, type: '''From Bio dot Seq import Seq'''. Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 02:15 | | 02:15 | ||
− | + | Ngin pyndonkam da ka '''Bio.Alphabet''' module ban pyntikna ia ki alphabets ha ka DNA sequence | |
− | + | ||
|- | |- | ||
| 02:22 | | 02:22 | ||
− | + | Type: '''from Bio dot Alphabet import generic underscore dna.''' Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 02:32 | | 02:32 | ||
− | + | Type ia ki '''command''' harum ban shna ia ka sequence object na ka bynta ka randon DNA sequence. | |
− | + | ||
|- | |- | ||
| 02:38 | | 02:38 | ||
− | + | Buh ia ka sequence ha ka variable '''dna1''' | |
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|- | |- | ||
| 02:42 | | 02:42 | ||
− | + | Sngewbha peit: ha kane ka command, pyndonkam ar tylli ki single quotes ha ka jaka ka double quote. Nion '''Enter''' | |
− | + | ||
|- | |- | ||
| 02:50 | | 02:50 | ||
− | + | Na ka bynta ka output, type: '''dna1'''. Nion '''Enter''' | |
− | + | ||
|- | |- | ||
| 02:55 | | 02:55 | ||
− | + | Ka output ka pyni ia ka '''sequence object''' na ka bynta ka random DNA sequence. | |
− | + | ||
|- | |- | ||
| 03:00 | | 03:00 | ||
− | + | Lada phi kwah ka sequence ba thymmai, nion u up-arrow key ban ioh ia ka juh ka command kum haneng. Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 03:11 | | 03:11 | ||
− | + | Na ka bynta ka output, type ia ka kyrteng ka variable '''dna1.''' Nion '''Enter''' | |
− | + | ||
|- | |- | ||
| 03:17 | | 03:17 | ||
− | + | Ka output ka pyni iaka DNA sequence ba thymmai kaba pher na kaba nyngkong. | |
− | + | ||
|- | |- | ||
| 03:23 | | 03:23 | ||
− | + | Shaphang ka '''Sequence Objects''' | |
− | + | ||
|- | |- | ||
| 03:25 | | 03:25 | ||
− | + | Ka '''sequence objects''' ha ka jingshisha ka long kum ka '''Python string'''s. | |
− | + | ||
|- | |- | ||
| 03:30 | | 03:30 | ||
− | + | Te, bud beit ia ka rukom leh kumba leh ia ka Python strings. | |
− | + | ||
|- | |- | ||
| 03:35 | | 03:35 | ||
− | + | Ha ka Python, ngi niew ia ki characters ha ka string kaba sdang na 0, ha jaka u 1. | |
− | + | ||
|- | |- | ||
| 03:41 | | 03:41 | ||
− | + | U character ba nyngkong ha ka sequence u dei u zero. | |
− | + | ||
|- | |- | ||
| 03:45 | | 03:45 | ||
− | + | Phai biang sha ka terminal. | |
− | + | ||
|- | |- | ||
| 03:47 | | 03:47 | ||
− | + | Teng teng ngi hap ban trei tang shi bynta jong ka sequence | |
− | + | ||
|- | |- | ||
| 03:52 | | 03:52 | ||
− | + | Mynta, ngin ia peit kumno ban sei ia ki bynta jong ka string bad buh ia ki kum ki sequence objects. | |
− | + | ||
|- | |- | ||
| 03:58 | | 03:58 | ||
− | + | Nuksa, ngin '''slice''' ia ka DNA sequence ha ki ar bynta. | |
− | + | ||
|- | |- | ||
| 04:04 | | 04:04 | ||
− | + | Nyngkong, hapdeng ki bases 6 bad 7. | |
− | + | ||
|- | |- | ||
| 04:08 | | 04:08 | ||
− | + | Kane kan sei ia ka fragment na kaba sdang jong ka sequence sha ka base ba 6 ha ka sequence. | |
− | + | ||
|- | |- | ||
| 04:15 | | 04:15 | ||
− | + | Ka slice ba ar kan dei hapdeng ka bases 11 bad 12. | |
− | + | ||
|- | |- | ||
| 04:20 | | 04:20 | ||
− | + | Ka fragment ba ar kan dei na ka base ba 12 shaduh ba kut jong ka sequence. | |
− | + | ||
|- | |- | ||
| 04:26 | | 04:26 | ||
− | + | Type ia ka command ba harum, ha ka prompt, ban sei ia ka fragment ba nyngkong. | |
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|- | |- | ||
| 04:31 | | 04:31 | ||
− | + | '''String1 equal to dna1 within brackets 0 semi-colon 6.''' | |
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|- | |- | ||
| 04:39 | | 04:39 | ||
− | + | '''string1''' ka dei ka variable ban lum ia ka fragment ba nyngkong. | |
− | + | ||
|- | |- | ||
| 04:43 | | 04:43 | ||
− | + | Ki command ba bud kin long beit kum ha ka Python. | |
− | + | ||
|- | |- | ||
| 04:47 | | 04:47 | ||
− | + | Hapoh kine ki brackets dei ki jaka ba sdang bad ba sangeh ba ba la pyniakhlad da u colon. | |
− | + | ||
|- | |- | ||
| 04:53 | | 04:53 | ||
− | + | Kine ki jaka ki kynthup lang ia kaba sdang hynrei khlem kynthup ïaki ha ka jaka ba sangeh. Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 05:01 | | 05:01 | ||
− | + | Ban peit ia ka output, type: "string1", nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 05:04 | | 05:04 | ||
− | + | Ka output ka pyni ia ka fragment ba nyngkong kum ka sequence object. | |
− | + | ||
|- | |- | ||
| 05:10 | | 05:10 | ||
− | + | Ban sei ia ka string ba ar na ka sequence, nion ia u up-arrow key bad '''edit''' ia ka command kumne harum: | |
− | + | ||
|- | |- | ||
| 05:17 | | 05:17 | ||
− | + | Pynkylla ia ka ka kyrteng jong u variable sha ka '''string2''' bad jaka sha u '''11 '''bad '''20'''. | |
− | + | ||
|- | |- | ||
| 05:24 | | 05:24 | ||
− | + | Na ka bynta ka output, type: "string2". Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 05:30 | | 05:30 | ||
− | + | Mynta ngi ioh ia ka fragment ba ar ruh kum ka sequence object. | |
− | + | ||
|- | |- | ||
| 05:34 | | 05:34 | ||
− | + | To ngin pynlong ïaki kawei, kata, ban pyndait lang ia baroh ar ki '''strings ''' ban pynlong u fragment ba thymmai. | |
− | + | ||
|- | |- | ||
| 05:42 | | 05:42 | ||
− | + | Buh ia ka sequence ba thymmai ha ka variable '''dna2'''. | |
− | + | ||
|- | |- | ||
| 05:46 | | 05:46 | ||
− | + | Type: '''dna2 equal to string1 plus string2'''. Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 05:53 | | 05:53 | ||
− | + | Sngewbha kynmaw ba: ngim lah ban thep ki sequence da ki alphabets ki bym iahap. | |
− | + | ||
|- | |- | ||
| 05:59 | | 05:59 | ||
− | + | Kata ka mut, ngim lah ban pynlong kawei ia ka DNA sequence bad ka protein sequence ban ioh ia ka sequence ba thymmai. | |
− | + | ||
|- | |- | ||
| 06:07 | | 06:07 | ||
− | + | Ki ar tylli ki sequences ki dei ban don kajuh ka alphabet attribute. | |
− | + | ||
|- | |- | ||
| 06:12 | | 06:12 | ||
− | + | Ban peit ia ka output, type: "dna2". Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 06:17 | | 06:17 | ||
− | + | Ka output ka pyni ia ka sequence ba thymmai kaba dei ka jing pyndait lang jong u '''string1''' bad '''string2.''' | |
− | + | ||
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| 06:23 | | 06:23 | ||
− | + | Ban ioh ia ka jingjrong jong ka sequence ba thymmai, ngin pyndonkam da ka '''len '''function. | |
− | + | ||
|- | |- | ||
| 06:29 | | 06:29 | ||
− | + | Type: "len" hapoh parenthesis"dna2". Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 06:34 | | 06:34 | ||
− | + | Ka output ka pyni ia ka sequence kaba jrong 15 bases. | |
− | + | ||
|- | |- | ||
| 06:39 | | 06:39 | ||
− | + | Ngi lah ruh ban niew ia ka jingdon jong ki bases bapher bapher ha ka sequence. | |
− | + | ||
|- | |- | ||
| 06:44 | | 06:44 | ||
− | + | Ban leh ia kane, ngin pyndonkam da ka '''count ''' function. | |
− | + | ||
|- | |- | ||
| 06:47 | | 06:47 | ||
− | + | Kum ka nuksa – ban niew ia ka jingdon jong u alanines ba don ha ka sequence, ngi type ia ka command ka ba harum: '''dna2 dot count''' hapoh parenthesis hapoh double quotes alphabet A. | |
− | + | ||
|- | |- | ||
| 07:02 | | 07:02 | ||
− | + | Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 07:04 | | 07:04 | ||
− | + | Ka output ka pyni ia ka jingdon jong u alanines ha ka sequence '''dna2'''. | |
− | + | ||
|- | |- | ||
| 07:10 | | 07:10 | ||
− | + | Ban shem ia u jait base ne u dkhot jong u string, ngin pyndonkam da u '''find ''' function. | |
− | + | ||
|- | |- | ||
| 07:16 | | 07:16 | ||
− | + | Type: '''dna2 dot find''' hapoh parenthesis hapoh double quotes "GC". Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 07:26 | | 07:26 | ||
− | + | Ka output ka pyni ia ka jaka ba nyngkong kaba mih ka '''GC''' ha u string. | |
− | + | ||
|- | |- | ||
| 07:32 | | 07:32 | ||
− | + | Ha ka jingshisha ia ka sequence object um ju lah ban pynkylla. | |
− | + | ||
|- | |- | ||
| 07:35 | | 07:35 | ||
− | + | Ban pynkylla ia ka sequence, ngi dei ban pynkylla iaka sha ka mutable sequence object. | |
− | + | ||
|- | |- | ||
| 07:41 | | 07:41 | ||
− | + | Ban leh ia kane, type: '''dna3 equal to dna2 dot to mutable''' plie bad khang ia u parenthesis. Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 07:52 | | 07:52 | ||
− | + | Na ka bynta ka output, type: '''dna3''' Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 07:55 | | 07:55 | ||
− | + | Mynta ngin sa lah ban pynkylla ia ka sequence object. | |
− | + | ||
|- | |- | ||
| 07:59 | | 07:59 | ||
− | + | To ngin ia bujli ia u '''base''' na ka sequence. | |
− | + | ||
|- | |- | ||
| 08:01 | | 08:01 | ||
− | + | Kum ka nuksa – ban bujli ia u base uba don ha ka jaka ba 5 sha ka alanine, type: '''dna3 within brackets 5 equal to within double quotes alphabet A.''' Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 08:19 | | 08:19 | ||
− | + | Na ka bynta ka output, type: '''dna3'''. Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 08:24 | | 08:24 | ||
− | + | Khmih thuh ia ka output. Ka '''cytosine''' ha ka jaka ba 5 la shah bujli da u '''alanine'''. | |
− | + | ||
|- | |- | ||
| 08:31 | | 08:31 | ||
− | + | Ban bujli ia ka shi bynta jong u '''string''', type ia ka command ba harum. | |
− | + | ||
|- | |- | ||
| 08:35 | | 08:35 | ||
− | + | '''Dna3 within brackets 6 semi-colon 10 equal to within double quotes ATGC.''' Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 08:45 | | 08:45 | ||
− | + | Na ka bynta ka output, type: '''dna3'''. Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 08:52 | | 08:52 | ||
− | + | Ka output ka pyni ia ki 4 tylli ki bases na ka jaka ba 6 haduh 9 kiba shah bujli da ki bases '''ATGC''' ba thymmai. | |
− | + | ||
|- | |- | ||
| 09:01 | | 09:01 | ||
− | + | Shisien ba phi lahdep dep pynkylla ia ka sequence object, pynkylla biang ia ka sha ka “read only” form. | |
− | + | ||
|- | |- | ||
| 09:07 | | 09:07 | ||
− | + | Type kumne harum'''dna4 equal to dna3 dot to seq open and close parenthesis'''. Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 09:19 | | 09:19 | ||
− | + | Na ka bynta ka output, type: '''dna4.''' Nion '''Enter'''. | |
− | + | ||
|- | |- | ||
| 09:25 | | 09:25 | ||
− | + | To ngin batai lyngkot | |
− | + | ||
− | + | ||
|- | |- | ||
| 09:27 | | 09:27 | ||
− | + | Ha kane ka tutorial, ngi lah pule ban * Generate a random DNA sequence | |
− | + | ||
|- | |- | ||
| 09:32 | | 09:32 | ||
− | + | Slice ia ka DNA sequence ha ki jaka ba lah buh. | |
− | + | ||
|- | |- | ||
| 09:36 | | 09:36 | ||
− | + | Pyndait lang ar tylli ki sequence ban ioh ia ka sequence ba thymmai, kata ka mut, ban pynlong kawei. | |
− | + | ||
|- | |- | ||
| 09:43 | | 09:43 | ||
− | + | Ngi lah pule ruh kumno ban: * use '''len, count''' bad '''find''' functions. | |
− | + | ||
|- | |- | ||
| 09:49 | | 09:49 | ||
− | + | Ban pynkylla ia ka sequence object sha ka mutable sequence object bad ban bujli ia u base lane shi bynta jong u string. | |
− | + | ||
|- | |- | ||
| 09:57 | | 09:57 | ||
− | + | Na ka bynta ka assignment, wad ia uno uno u '''DNA sequence''' uba 30 bases. | |
− | + | ||
|- | |- | ||
| 10:02 | | 10:02 | ||
− | + | Da kaba pyndonkam da u Biopython tools, khein ia ka GC percentage bad molecular weight jong ka sequence. | |
− | + | ||
|- | |- | ||
| 10:09 | | 10:09 | ||
− | + | Ka assignment ba lah dep jong phi kan long kumne harum. | |
− | + | ||
|- | |- | ||
| 10:13 | | 10:13 | ||
− | + | Ka output ka pyni ia ka '''GC'''content ha ka percentage. | |
− | + | ||
|- | |- | ||
| 10:18 | | 10:18 | ||
− | + | Ka output ka pyni ia ka molecular weight jong ka DNA sequence. | |
− | + | ||
|- | |- | ||
| 10:23 | | 10:23 | ||
− | + | Kane ka video ka batai lyngkot ia ka Spoken Tutorial project. | |
− | + | ||
|- | |- | ||
| 10:26 | | 10:26 | ||
− | + | Lada phim don ka bandwidth ba biang, phi lah ban download bad peit ia ka. | |
− | + | ||
|- | |- | ||
| 10:30 | | 10:30 | ||
− | + | Ngi pynlong workshops bad ai certificates. | |
− | + | ||
|- | |- | ||
| 10:32 | | 10:32 | ||
− | + | Sngewbha thoh sha ngi | |
− | + | ||
|- | |- | ||
| 10:35 | | 10:35 | ||
− | + | Ia ka Spoken-Tutorial project la kyrshan da ka National Mission on Education through ICT, MHRD, Government of India. | |
− | + | ||
|- | |- | ||
| 10:43 | | 10:43 | ||
− | + | ïa kane ka script la pynkylla sha ka Ktien Khasi da u Yuwanki Yolande Kharlukhi na Shillong, Bad ma nga u Hezekiah Lyngdoh, ngan pynkut noh. Khublei ba phi la ïasnoh lang. | |
− | + | ||
|} | |} |
Revision as of 20:40, 21 April 2018
Time | Narration |
00:01 Ngi pdiang sngewbha ia phi sha kane ka tutorial halor ka Manipulating Sequences.
| |
00:06 Ha kane ka tutorial, ngin pyndonkam ki tools ka Biopython: Ban pynmih ia u random DNA sequence | |
00:13
Phiah ia u DNA sequence ha ki jaka ba lah buh | |
00:17
Pyndait lang ia artylli ki sequences ban pynlong kawei ka sequence ba thymmai | |
00:22
Wad ia ka jingjrong jong ka sequence | |
00:26
Niew ia ki number jong ki base lane ki dkhot jong u string | |
00:31
Wad ia u base ba la thmu lane bynta jong u string | |
00:35
Pynkylla ia ka sequence object sha ka mutable sequence object | |
00:40
Ban bud ia kane ka tutorial, phi dei ban tip bha ia ka undergraduate Biochemistry lane Bioinformatics | |
00:47
Bad ka basic Python programming | |
00:51
Lada em, peit ia ki tutorials Python ha ka link ba la ai | |
00:56
Ban record ia kane ka tutorial, nga pyndonkam da ka * Ubuntu OS version 14.10 | |
01:03
Python version 2.7.8 | |
01:07
Ipython interpreter version 2.3.0 | |
01:12
Biopython version 1.64. | |
01:16
To ngin ia plie iaka terminal bad sdang ia ka ipython interpreter | |
01:21
Nion lang ia u Ctrl, Alt and t key | |
01:26
Ha ka prompt, type: "ipython" bad sa nion Enter | |
01:31
Ka Ipython prompt kan sa mih ha ka screen | |
01:35
Da kaba pyndonkam ia ka Biopython, ngi lah ban pynmih ia ka sequence object na ka bynta ka random DNA sequence ha kano kano ka jingjrong | |
01:44
To mynta ngin ia pynmih ia ka sequence object na ka bynta ka DNA sequence kaba 20 bases | |
01:50
Ha ka prompt, type: "import random", bad nion Enter. | |
01:56
Nangta, import Seq module na Bio package. | |
02:01
Bunsien Seq ngi ju pronounce kum seek. | |
02:06
Ha ka prompt, type: From Bio dot Seq import Seq. Nion Enter. | |
02:15
Ngin pyndonkam da ka Bio.Alphabet module ban pyntikna ia ki alphabets ha ka DNA sequence | |
02:22
Type: from Bio dot Alphabet import generic underscore dna. Nion Enter. | |
02:32
Type ia ki command harum ban shna ia ka sequence object na ka bynta ka randon DNA sequence. | |
02:38
Buh ia ka sequence ha ka variable dna1 | |
02:42
Sngewbha peit: ha kane ka command, pyndonkam ar tylli ki single quotes ha ka jaka ka double quote. Nion Enter | |
02:50
Na ka bynta ka output, type: dna1. Nion Enter | |
02:55
Ka output ka pyni ia ka sequence object na ka bynta ka random DNA sequence. | |
03:00
Lada phi kwah ka sequence ba thymmai, nion u up-arrow key ban ioh ia ka juh ka command kum haneng. Nion Enter. | |
03:11
Na ka bynta ka output, type ia ka kyrteng ka variable dna1. Nion Enter | |
03:17
Ka output ka pyni iaka DNA sequence ba thymmai kaba pher na kaba nyngkong. | |
03:23
Shaphang ka Sequence Objects | |
03:25
Ka sequence objects ha ka jingshisha ka long kum ka Python strings. | |
03:30
Te, bud beit ia ka rukom leh kumba leh ia ka Python strings. | |
03:35
Ha ka Python, ngi niew ia ki characters ha ka string kaba sdang na 0, ha jaka u 1. | |
03:41
U character ba nyngkong ha ka sequence u dei u zero. | |
03:45
Phai biang sha ka terminal. | |
03:47
Teng teng ngi hap ban trei tang shi bynta jong ka sequence | |
03:52
Mynta, ngin ia peit kumno ban sei ia ki bynta jong ka string bad buh ia ki kum ki sequence objects. | |
03:58
Nuksa, ngin slice ia ka DNA sequence ha ki ar bynta. | |
04:04
Nyngkong, hapdeng ki bases 6 bad 7. | |
04:08
Kane kan sei ia ka fragment na kaba sdang jong ka sequence sha ka base ba 6 ha ka sequence. | |
04:15
Ka slice ba ar kan dei hapdeng ka bases 11 bad 12. | |
04:20
Ka fragment ba ar kan dei na ka base ba 12 shaduh ba kut jong ka sequence. | |
04:26
Type ia ka command ba harum, ha ka prompt, ban sei ia ka fragment ba nyngkong. | |
04:31
String1 equal to dna1 within brackets 0 semi-colon 6. | |
04:39
string1 ka dei ka variable ban lum ia ka fragment ba nyngkong. | |
04:43
Ki command ba bud kin long beit kum ha ka Python. | |
04:47
Hapoh kine ki brackets dei ki jaka ba sdang bad ba sangeh ba ba la pyniakhlad da u colon. | |
04:53
Kine ki jaka ki kynthup lang ia kaba sdang hynrei khlem kynthup ïaki ha ka jaka ba sangeh. Nion Enter. | |
05:01
Ban peit ia ka output, type: "string1", nion Enter. | |
05:04
Ka output ka pyni ia ka fragment ba nyngkong kum ka sequence object. | |
05:10
Ban sei ia ka string ba ar na ka sequence, nion ia u up-arrow key bad edit ia ka command kumne harum: | |
05:17
Pynkylla ia ka ka kyrteng jong u variable sha ka string2 bad jaka sha u 11 bad 20. | |
05:24
Na ka bynta ka output, type: "string2". Nion Enter. | |
05:30
Mynta ngi ioh ia ka fragment ba ar ruh kum ka sequence object. | |
05:34
To ngin pynlong ïaki kawei, kata, ban pyndait lang ia baroh ar ki strings ban pynlong u fragment ba thymmai. | |
05:42
Buh ia ka sequence ba thymmai ha ka variable dna2. | |
05:46
Type: dna2 equal to string1 plus string2. Nion Enter. | |
05:53
Sngewbha kynmaw ba: ngim lah ban thep ki sequence da ki alphabets ki bym iahap. | |
05:59
Kata ka mut, ngim lah ban pynlong kawei ia ka DNA sequence bad ka protein sequence ban ioh ia ka sequence ba thymmai. | |
06:07
Ki ar tylli ki sequences ki dei ban don kajuh ka alphabet attribute. | |
06:12
Ban peit ia ka output, type: "dna2". Nion Enter. | |
06:17
Ka output ka pyni ia ka sequence ba thymmai kaba dei ka jing pyndait lang jong u string1 bad string2. | |
06:23
Ban ioh ia ka jingjrong jong ka sequence ba thymmai, ngin pyndonkam da ka len function. | |
06:29
Type: "len" hapoh parenthesis"dna2". Nion Enter. | |
06:34
Ka output ka pyni ia ka sequence kaba jrong 15 bases. | |
06:39
Ngi lah ruh ban niew ia ka jingdon jong ki bases bapher bapher ha ka sequence. | |
06:44
Ban leh ia kane, ngin pyndonkam da ka count function. | |
06:47
Kum ka nuksa – ban niew ia ka jingdon jong u alanines ba don ha ka sequence, ngi type ia ka command ka ba harum: dna2 dot count hapoh parenthesis hapoh double quotes alphabet A. | |
07:02
Nion Enter. | |
07:04
Ka output ka pyni ia ka jingdon jong u alanines ha ka sequence dna2. | |
07:10
Ban shem ia u jait base ne u dkhot jong u string, ngin pyndonkam da u find function. | |
07:16
Type: dna2 dot find hapoh parenthesis hapoh double quotes "GC". Nion Enter. | |
07:26
Ka output ka pyni ia ka jaka ba nyngkong kaba mih ka GC ha u string. | |
07:32
Ha ka jingshisha ia ka sequence object um ju lah ban pynkylla. | |
07:35
Ban pynkylla ia ka sequence, ngi dei ban pynkylla iaka sha ka mutable sequence object. | |
07:41
Ban leh ia kane, type: dna3 equal to dna2 dot to mutable plie bad khang ia u parenthesis. Nion Enter. | |
07:52
Na ka bynta ka output, type: dna3 Nion Enter. | |
07:55
Mynta ngin sa lah ban pynkylla ia ka sequence object. | |
07:59
To ngin ia bujli ia u base na ka sequence. | |
08:01
Kum ka nuksa – ban bujli ia u base uba don ha ka jaka ba 5 sha ka alanine, type: dna3 within brackets 5 equal to within double quotes alphabet A. Nion Enter. | |
08:19
Na ka bynta ka output, type: dna3. Nion Enter. | |
08:24
Khmih thuh ia ka output. Ka cytosine ha ka jaka ba 5 la shah bujli da u alanine. | |
08:31
Ban bujli ia ka shi bynta jong u string, type ia ka command ba harum. | |
08:35
Dna3 within brackets 6 semi-colon 10 equal to within double quotes ATGC. Nion Enter. | |
08:45
Na ka bynta ka output, type: dna3. Nion Enter. | |
08:52
Ka output ka pyni ia ki 4 tylli ki bases na ka jaka ba 6 haduh 9 kiba shah bujli da ki bases ATGC ba thymmai. | |
09:01
Shisien ba phi lahdep dep pynkylla ia ka sequence object, pynkylla biang ia ka sha ka “read only” form. | |
09:07
Type kumne harumdna4 equal to dna3 dot to seq open and close parenthesis. Nion Enter. | |
09:19
Na ka bynta ka output, type: dna4. Nion Enter. | |
09:25
To ngin batai lyngkot | |
09:27
Ha kane ka tutorial, ngi lah pule ban * Generate a random DNA sequence | |
09:32
Slice ia ka DNA sequence ha ki jaka ba lah buh. | |
09:36
Pyndait lang ar tylli ki sequence ban ioh ia ka sequence ba thymmai, kata ka mut, ban pynlong kawei. | |
09:43
Ngi lah pule ruh kumno ban: * use len, count bad find functions.
| |
09:49
Ban pynkylla ia ka sequence object sha ka mutable sequence object bad ban bujli ia u base lane shi bynta jong u string. | |
09:57
Na ka bynta ka assignment, wad ia uno uno u DNA sequence uba 30 bases. | |
10:02
Da kaba pyndonkam da u Biopython tools, khein ia ka GC percentage bad molecular weight jong ka sequence. | |
10:09
Ka assignment ba lah dep jong phi kan long kumne harum. | |
10:13
Ka output ka pyni ia ka GCcontent ha ka percentage. | |
10:18
Ka output ka pyni ia ka molecular weight jong ka DNA sequence. | |
10:23
Kane ka video ka batai lyngkot ia ka Spoken Tutorial project. | |
10:26
Lada phim don ka bandwidth ba biang, phi lah ban download bad peit ia ka. | |
10:30
Ngi pynlong workshops bad ai certificates. | |
10:32
Sngewbha thoh sha ngi | |
10:35
Ia ka Spoken-Tutorial project la kyrshan da ka National Mission on Education through ICT, MHRD, Government of India. | |
10:43
ïa kane ka script la pynkylla sha ka Ktien Khasi da u Yuwanki Yolande Kharlukhi na Shillong, Bad ma nga u Hezekiah Lyngdoh, ngan pynkut noh. Khublei ba phi la ïasnoh lang. |