CellDesigner/C2/Overview-of-CellDesigner/English-timed
From Script | Spoken-Tutorial
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| 00:01 | Hello and welcome to this overview Spoken Tutorial on CellDesigner. |
| 00:08 | In this tutorial, we will learn about the CellDesigner series and the content available in various tutorials under this series. |
| 00:21 | In this series, I have used Version 4.3. |
| 00:27 | This was the latest available version at the time of creating this tutorial series. |
| 00:36 | Version 4.3 and above, is recommended for practising these tutorials. |
| 00:45 | If you are a first-time user of CellDesigner, please go through the Startup Guide Version 4.3. |
| 00:56 | This contains step-by-step instructions of using the tool bar. |
| 01:03 | The link for the guide is as shown here. |
| 01:08 | Now, we will briefly go through the individual tutorials in this series. |
| 01:16 | The very first tutorial in this series explains installation of CellDesigner on a Windows machine. |
| 01:27 | Here is a glimpse of the tutorial. |
| 01:43 | The next tutorial will help us to understand Menu and toolbars, |
| 01:52 | areas in CellDesigner and components in CellDesigner. |
| 1:59 | This tutorial was recorded on Windows OS. |
| 02:05 | However, all the features explained therein will work in the same manner on Linux OS also. |
| 02:17 | Linux users should not skip this tutorial. |
| 02:23 | Let us have a look at this tutorial. |
| 02:40 | The next tutorial is Installation of CellDesigner on Linux. |
| 02:47 | Here is a glimpse of the tutorial. |
| 03:00 | The next tutorial is ‘Create and Edit Components’. |
| 03:07 | This will help us to know how: to open an already saved .xml file, |
| 03:17 | change the size, shape, color and thickness of the border in a Compartment. |
| 03:26 | create multiple files in CellDesigner, |
| 03:30 | learn about start-point and end-point of a Species, |
| 03:37 | change identity of Species and Reaction. |
| 03:41 | Let me play this tutorial. |
| 03:52 | The next tutorial will explain how to- use Macros, |
| 03:59 | move all components to another side of the draw area, |
| 04:04 | align a Reaction line , extend a Reaction line and Build a Process diagram using CellDesigner. |
| 04:16 | Let’s have a look at this tutorial. |
| 04:30 | The next tutorial ‘Customizing Diagram Layout’ will explain how to- change color, shape and width of a Reaction line, |
| 04:44 | add Anchor points to a Reaction line, align Components, |
| 04:50 | show/hide Reaction ids, add notes to Components, |
| 04:57 | edit Protein, edit information and get a bird’s eye view of the diagram. |
| 05:06 | Here is a glimpse of the tutorial. |
| 05:18 | Let us summarize. |
| 05:20 | In this tutorial we learnt about the Overview of the CellDesigner series. |
| 05:29 | Please refer http://spoken-tutorial.org for the detailed tutorials on each topic mentioned. |
| 05:39 | Watch the video at the following link. It summarizes the Spoken Tutorial project. If you do not have a good bandwidth please download and watch it. |
| 05:52 | The Spoken Tutorial Project Team - conducts Workshops and gives certificates to those
who pass an online test. For more details, please write to contact@spoken-tutorial.org |
| 06:10 | Spoken Tutorial Project is a part of Talk to a Teacher project. It is funded by NMEICT, MHRD, Government of India. More information on this mission is available at the given link. |
| 06:27 | This is Bella Tony from IIT Bombay, signing off.
Thank you for joining. |
