GChemPaint/C2/Introduction-to-GChemPaint/English-timed
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Title of the tutorial: Introduction-to-GChemPaint
Author: Madhuri Ganapathi
Key words: About GChemPaint, Installation, Open a new file, Menubar, Toolbar and Status bar, Display area, Document properties, tool box, Add a chain tool and video tutorial.
Time | Narration |
---|---|
00:01 | Hello everyone. |
00:02 | Welcome to the tutorial on Introduction to GChemPaint. |
00:07 | In this tutorial, we will learn: |
00:11 | *About GChemPaint |
00:13 | *Uses and Benefits |
00:16 | *Installation |
00:17 | *Open a new file |
00:20 | *Menubar, Toolbar and Status bar. |
00:25 | We will also learn about: |
00:28 | *Display area |
00:30 | *Document properties |
00:32 | *Using tool box and |
00:34 | *Saving the drawing with extension .gchempaint. |
00:40 | Here I am using |
00:42 | Ubuntu Linux OS version. 12.04, |
00:47 | GChemPaint version 0.12.10. |
00:53 | To follow this tutorial you should have knowledge of, |
00:59 | basics of Chemistry upto VIII standard. |
01:04 | GChemPaint can be very easily installed using Ubuntu Software Center. |
01:12 | For more information on Ubuntu software Center, |
01:16 | please refer to Ubuntu Linux Tutorials on our website. |
01:23 | What is GChemPaint? |
01:26 | GChemPaint is a two dimensional chemical structure editor. |
01:32 | It has a multiple document interface. |
01:37 | GChemPaint allows you to, |
01:40 | *Draw and display two dimensional chemical structures. |
01:46 | *Drag and drop of templates |
01:50 | *Change length, angle and width of the bonds |
01:55 | *Use Chemical Calculator to calculate molecular weight of compounds. |
02:03 | GChemPaint helps in: |
02:05 | *Easy visualization of chemical structures |
02:11 | *Converting two dimensional structures to three dimensional structures |
02:17 | *Magnification of structures |
02:21 | *Automatic and manual assignment of atoms. |
02:26 | Let's first see how to open a new GChemPaint application. |
02:33 | Click on Dash home >> Search bar appears >> In the Search bar type GChemPaint. |
02:41 | Click on the GChemPaint icon. |
02:46 | We can also open GChemPaint application from Terminal. |
02:52 | Press Ctrl, Alt and T keys simultaneously, to open the Terminal. |
02:58 | Type GChemPaint and press Enter. |
03:04 | GChemPaint application opens. |
03:08 | A typical GChemPaint window looks like this. |
03:13 | This is the Menu-bar. |
03:15 | GChempaint has a standard menu-bar like other window based applications. |
03:22 | Menu bar contain menu items like File, Edit, View, Tools, Windows and Help options. |
03:34 | Toolbar contains most frequently used commands as icons. |
03:41 | There are icons to open a New file, |
03:45 | Open existing file, |
03:48 | Save a file and Print a file. |
03:53 | This is the Display area. |
03:56 | Display area shows the structures and the contents of the file that we draw and edit. |
04:06 | We can drag and drop tools from toolbox into the Display area. |
04:14 | Status-bar displays information about current GChemPaint activity. |
04:20 | It also displays contextual information about menu items. |
04:28 | Now I will explain about Document Properties. |
04:33 | To open Document Properties window, |
04:37 | click on File menu. |
04:39 | Navigate to Properties and click on it. |
04:43 | Document Properties window opens. |
04:47 | I will drag the Document Properties window to maximize it. |
04:53 | Document properties window has the following fields. |
04:59 | Title- Let's type the title of the document as “Propane”. |
05:06 | Author's Name- let's type author's name as Madhuri. |
05:14 | Email– Let's leave it blank. |
05:17 | History – This field shows the Creation date of the document. |
05:23 | It also shows the Revision date of the document. |
05:28 | This means, it also shows the next edited date of the document. |
05:35 | Theme- let's leave this field as GChemPaint. |
05:39 | Comments- In the Comments field, we can add text related to the document. |
05:46 | Let's enter name of the compound and its formula. |
05:51 | Propane CH3-CH2-CH3 |
06:01 | Let's click on Close button to close the window. |
06:05 | Next let's learn about Toolbox. |
06:09 | Toolbox contains buttons for different tools. |
06:14 | Toolbox is displayed along with the active document window. |
06:20 | Let's now draw structures using Toolbox buttons. |
06:25 | Let's first draw the structure of propane. |
06:30 | Propane is CH3-CH2-CH3 |
06:36 | Let's use Add a Chain tool from Tool box to draw a Carbon chain. |
06:42 | Click on Add a Chain tool, |
06:45 | and then click on Display area. |
06:48 | A Carbon chain is drawn on the Display area. |
06:53 | To change the orientation of the chain, |
06:57 | click on Add a Chain tool. |
07:00 | In the Display area, click and hold the left mouse button to orient the chain. |
07:07 | Do not release the left mouse button until the direction of the chain is fixed. |
07:15 | Release the left mouse button after fixing the direction. |
07:20 | We see that carbon chain is drawn. |
07:24 | Note, once we click on the Display area, the chain length and orientation of the chain are fixed. |
07:33 | Let's now display atoms at each position on the chain. |
07:39 | Here we have 3 positions to display atoms. |
07:43 | Right click on the first position, |
07:47 | a Sub-menu opens. |
07:49 | Select Atom and then click on Display symbol, to display atoms at that position. |
07:59 | Like wise, let's display atoms on all positions. |
08:04 | Right click Select Atom. |
08:07 | click on Display symbol. |
08:12 | Here the structure of “Propane” is drawn. |
08:17 | Let's next draw a pentane structure on the same window. |
08:23 | Click on Add a Chain tool, |
08:26 | then click on Display area. |
08:29 | To increase the chain length, hold the left mouse button and drag the cursor. |
08:36 | Change orientation in the desired direction and release the left mouse button. |
08:43 | Let's display atoms on all positions. |
08:47 | Here we have 5 positions to display atoms. |
08:52 | To display atoms on the first position, right click. A sub-menu opens. |
08:58 | Select Atoms and then click on Display symbol. |
09:03 | Like wise let's display atoms on all positions. |
09:17 | Here the structure of pentane is drawn. |
09:21 | Let's now save the file. |
09:24 | click on File Menu select Save as . |
09:27 | Save As dialog box opens. |
09:30 | For File type, click on the drop down arrow. |
09:35 | Various save formats are seen. |
09:39 | Select 2D Chemical structure. |
09:43 | Type the file name as propane.gchempaint, |
09:52 | and click on Save button. |
09:55 | File is saved with .gchempaint extension. |
10:00 | With this, we come to the end of this tutorial. |
10:04 | Let's summarize. |
10:06 | In this tutorial we have learnt, |
10:09 | *About GChemPaint |
10:10 | *Uses and Benefits |
10:12 | *Installation |
10:14 | *Open a new file |
10:16 | *Menu-bar, Toolbar and Status bar |
10:20 | We have also learnt about: |
10:23 | *Display area |
10:25 | *Document Properties |
10:26 | *Using tool box and |
10:28 | *Save the drawing with extension .gchempaint |
10:33 | As an assignment I would like you to: |
10:36 | 1. Draw structures of n-hexane and n-octane |
10:41 | 2. Change the orientation |
10:43 | 3. Display atoms on each position |
10:47 | Output of the assignment should look like this. |
10:53 | Watch the video available at this URL: |
10:57 | It summarizes the Spoken Tutorial project. |
11:00 | If you do not have good bandwidth, you can download and watch it. |
11:05 | The Spoken Tutorial Project Team: |
11:07 | Conducts workshops using spoken tutorials |
11:10 | Gives certificates to those who pass an online test. |
11:14 | For more details, please write to contact@spoken-tutorial.org. |
11:21 | Spoken Tutorial Project is a part of the Talk to a Teacher project. |
11:26 | It is supported by the National Mission on Education through ICT, MHRD, Government of India. |
11:34 | More information on this Mission is available at this link. |
11:40 | This is Madhuri Ganpathi from IIT Bombay signing off. Thank you for joining. |