GChemPaint/C3/Analysis-of-compounds/English - Revision history

Nancyvarkey at 08:45, 13 March 2014

2014-03-13T08:45:09Z

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Madhurig at 06:33, 13 March 2014

2014-03-13T06:33:08Z

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Madhurig at 12:00, 4 March 2014

2014-03-04T12:00:23Z

Madhurig at 11:58, 4 March 2014

2014-03-04T11:58:06Z

Madhurig at 11:56, 4 March 2014

2014-03-04T11:56:43Z

Madhurig at 11:47, 4 March 2014

2014-03-04T11:47:16Z

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Madhurig at 11:25, 4 March 2014

2014-03-04T11:25:21Z

Madhurig at 10:44, 4 March 2014

2014-03-04T10:44:53Z

Madhurig at 10:42, 4 March 2014

2014-03-04T10:42:14Z

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Madhurig at 10:11, 4 March 2014

2014-03-04T10:11:52Z

@@ Line 434: / Line 434: @@
 Draw chemical reaction of:
-)Benzene and Chlorine(Cl-Cl) molecule with Anhydrous  Aluminum Chloride(AlCl<sub>3</sub>) as a catalyst.
+)Propene (C3H6)(C<sub>3</sub>H<sub>6</sub>) and Bromine(Br-Br) molecule with Carbon tetra chloride(CCl<sub>4</sub>) as a catalyst.
 Your completed assignment should look like this.

@@ Line 242: / Line 242: @@
 (Show Screen shot of the reaction)
-||This is a chemical reaction of '''Ethyl chloride'''  ('''C<sub>2</sub>H<sub>5</sub>Cl''') with '''Alcoholic Potassium hydroxide(Alc.KOH)''' and '''Aqueous Potassium hydroxide(Aq.KOH)''' to yield '''Ethene(C<sub>2</sub>H<sub>4</sub>)''' and '''Ethanol(C<sub>2</sub>H<sub>5</sub>OH)''' respectively.
+||This is a chemical reaction of
 |-
 ||Point to the new window.
-Open a new '''GChemPaint''' window.
+||Open a new '''GChemPaint''' window.
 |-
 ||

@@ Line 24: / Line 24: @@
 ||In this tutorial, we will learn about,
-* '''Molecular''' contextual menu
+* Molecular contextual menu
 * Save the molecule in ''.mol'' format
@@ Line 139: / Line 139: @@
 |-
 ||Right click on '''Alanine''' to '''Open in Calculator'''.
 Move the cursor on Chemical calculator window.
-||'''Right click''' on '''Alanine''' and choose '''Open in Calculator''' option.
+Move the cursor on '''Chemical calculator''' window.
 '''Chemical calculator''' window will open, provided the '''Chemical calculator''' is installed.
@@ Line 348: / Line 349: @@
 |-
 ||Click on '''Current Element''' arrow.
-In the Tool box, ensure that '''Current element''' is '''Carbon'''.
+||In the Tool box, ensure that '''Current element''' is '''Carbon'''.
 |-
 ||Click on '''Add a bond''' tool>>Click on the bond.
@@ Line 425: / Line 426: @@
 * Convert reaction molecules into 3D structures.
 |-
-||Slide Number 9
+||'''Slide Number 9'''
 Assignment
 ||Here is an assignment
 Draw chemical reaction of:
-)Propene (C3H6) and Bromine(Br-Br) molecule. with Carbon tetra chloride(CCl4) as a catalyst.
+)Propene (C3H6)(C<sub>3</sub>H<sub>6</sub>) and Bromine(Br-Br) molecule. with Carbon tetra chloride(CCl<sub>4</sub>) as a catalyst.
-)Benzene and Chlorine(Cl-Cl) molecule with Anhydrous  Aluminum Chloride(AlCl3) as a catalyst.
 Your completed assignment should look like this.
 |-

@@ Line 91: / Line 91: @@
 I will discuss 3 of them in this tutorial, namely-
-* NIST webbook page for this molecule
+* '''NIST''' webbook page for this molecule
-* PubChem page for this molecule and
+*''' PubChem''' page for this molecule and
-* Open in Calculator
+* '''Open in Calculator'''
 |-
 ||Click on '''NIST''' webbook page for this molecule.
@@ Line 101: / Line 101: @@
 |-
 ||Move the cursor over the page.
-|'''|Alanine's NIST''' webpage opens.
+||'''Alanine's NIST''' webpage opens.
 It shows all the details about '''Alanine'''.
@@ Line 110: / Line 110: @@
 ||Now right click on '''Alanine''' to open '''PubChem''' page for this molecule.
-PubChem webpage opens.
+'''PubChem''' webpage opens.
 |-
 ||Point to the structure on the webpage.
-||Click on Alanine structure in this webpage.
+||Click on '''Alanine''' structure in this webpage.
-A new web-page with 2D Structure and 3D Conformer tabs, is seen.
+A new web-page with '''2D Structure''' and '''3D Conformer''' tabs, is seen.
 |-
-||Click on 3D Conformer tab to view the structure in 3 dimension
+||Click on '''3D Conformer''' tab to view the structure in 3 dimension
-||Click on 3D Conformer tab to view Alanine structure in 3 dimensions.
+||Click on '''3D Conformer''' tab to view '''Alanine''' structure in 3 dimensions.
 |-
-||Click on the 3D structure
+||Click on the 3D structure.
 ||Click on the displayed 3D structure.
 This opens the structure in a separate window with some controls on the top and the left.
 |-
-||Click on the Rotation icon
+||Click on the '''Rotation''' icon
-||Click on the Rotation icon to rotate the structure in various directions.
+||Click on the '''Rotation''' icon to rotate the structure in various directions.
 |-
-||Click on H icon
+||Click on ''' H''' icon
 Point to the Hydrogen atoms in white.
-||On the same page, click on H icon to show hydrogens.
+Point to the '''Hydrogen''' atoms in white.
 These are the Hydrogen atoms.
 |-
-||Switch to GChemPaint.
+||Switch to '''GChemPaint'''.
-||Let's switch to GChemPaint window again.
+||Let's switch to '''GChemPaint''' window again.
 |-
-||Right click on Alanine to Open in Calculator.
+||Right click on '''Alanine''' to '''Open in Calculator'''.
 Move the cursor on Chemical calculator window.
-||Right-click on '''Alanine''' and choose '''Open in Calculator''' option.
+||'''Right click''' on '''Alanine''' and choose '''Open in Calculator''' option.
 '''Chemical calculator''' window will open, provided the '''Chemical calculator''' is installed.
-If not, then please install the same, using '''Synaptic Package Manager''', as mentioned in the Overview tutorial.
+If not, then please install the same, using '''Synaptic Package Manager''', as mentioned in the '''Overview''' tutorial.
 |-
 ||Point to the tabs.
@@ Line 161: / Line 163: @@
 Point to the graph and the peak.
-||Click on Isotropic Pattern tab.
+||Click on '''Isotropic Pattern''' tab.
 It shows a graph of mass spectrum with a peak at '''Molecular weight''' of the compound.
@@ Line 192: / Line 194: @@
 ||Right click at each position to show atoms.
-Click on 'Atom' then on 'Display symbol'.
+Click on '''Atom''' then on '''Display symbol'''.
 |-
-||Click on Save the current file icon on the tool bar.
+||Click on '''Save the current file''' icon on the tool bar.
-||To convert 1,3-butadiene 2D structure to 3D structure, click on Save icon in the tool bar.
+||To convert '''1,3-butadiene''' 2D structure to 3D structure, click on '''Save the current file''' icon in the tool bar.
 |-
-||Save as dialog box opens.
+||'''Save as''' dialog box opens.
-||Save as dialog box opens.
+||'''Save as''' dialog box opens.
 |-
-||Point to  File type field>>select MDL Molfile Format.
+||Point to  '''File type''' field>>select '''MDL Molfile''' Format.
-||In the File type field, select MDL Molfile Format.
+||In the '''File type''' field, select '''MDL Molfile''' Format.
 |-
-||Type filename as 1,3-butadiene.
+||Type filename as '''1,3-butadiene'''.
-Click on Save button.
-||Type filename as 1,3-butadiene.
-Select Desktop folder to save the file on Desktop.
+Click on '''Save''' button.
-Then click on Save button.
+Select '''Desktop''' folder to save the file on '''Desktop'''.
 |-
-||Type and show 1,3-butadiene.mol and 1,3-butadiene.mdl
+||Type and show '''1,3-butadiene.mol''' and '''1,3-butadiene.mdl'''
-||Alternatively, you can also save the file with extension .mol or .mdl directly.
+||Alternatively, you can also save the file with extension ''.mol'' or ''.mdl'' directly.
-For example as 1,3-butadiene.mol and 1,3-butadiene.mdl
+For example as '''1,3-butadiene.mol''' and '''1,3-butadiene.mdl'''
 |-
-||Right click on saved file and Open With Molecules viewer.
+||Right click on saved file and '''Open With Molecules viewer'''.
-||To view the structure in 3D, right-click on the saved file.
+||To view the structure in 3D, right click on the saved file.
-Then select the option Open With Molecules viewer.
+Then select the option '''Open With Molecules viewer'''.
 Please note, we cannot make changes in the structure.
 |-
 ||Move the mouse pointer over the structure
-||To rotate the 3D structure,  place the cursor on the structure, hold and drag the mouse.
+||To rotate the 3D structure, place the cursor on the structure, hold and drag the mouse.
 |-
-||Slide Number 6
+||'''Slide Number 6'''
 Assignment
 ||As an assignment,
-Convert Benzene structure from 2D to 3D.
+Convert '''Benzene''' structure from 2D to 3D.
 |-
 ||
-||
+||Now let's learn to draw chemical reactions and reaction conditions.
 Now let's learn to draw chemical reactions and reaction conditions.
 |-
-||Slide Number 7
+||'''Slide Number 7'''
 (Show Screen shot of the reaction)
-||This is a chemical reaction of Ethyl chloride (C2H5Cl) with Alcoholic Potassium hydroxide(Alc.KOH) and Aqueous Potassium hydroxide(Aq.KOH) to yield Ethene(C2H4) and Ethanol(C2H5OH) respectively.
+||This is a chemical reaction of '''Ethyl chloride'''  ('''C<sub>2</sub>H<sub>5</sub>Cl''') with Alcoholic Potassium hydroxide(Alc.KOH) and Aqueous Potassium hydroxide(Aq.KOH) to yield Ethene(C<sub>2</sub>H<sub>4</sub>) and Ethanol(C<sub>2</sub>H<sub>5</sub>OH) respectively.
 |-
 ||Point to the new window.

@@ Line 24: / Line 24: @@
 ||In this tutorial, we will learn about,
-* Molecular contextual menu
+* '''Molecular''' contextual menu
-* Save the molecule in .mol format
+* Save the molecule in ''.mol'' format
 * Add and edit a reaction
@@ Line 51: / Line 51: @@
 '''GChemPaint.'''
-If not, for relevant tutorials,  please visit our website.
+If not, for relevant tutorials, please visit our website.
 |-
-||Switch to GChemPaint window
+||Switch to '''GChemPaint''' window
-||Let us open a new GChemPaint window.
+||Let us open a new '''GChemPaint''' window.
 |-
 ||Click on '''Use or manage templates''' tool.
@@ Line 71: / Line 71: @@
 Structure of '''Alanine''' is loaded onto the '''Templates''' property page.
 |-
-||Click on structure>>click on the Display area to load it.
+||Click on structure>>click on the '''Display area''' to load it.
-||Click on the structure and then click on the Display area to load it.
+||Click on the structure and then click on the '''Display area''' to load it.
 |-
 ||
-||Now, I will explain about contextual menu of Alanine molecule.
+||Now, I will explain about contextual menu of '''Alanine''' molecule.
 |-
-||Right click on molecule> submenu opens>>
+||Right click on molecule> Submenu opens>>
 select '''Molecule''' >> molecule's contextual menu opens.

@@ Line 60: / Line 60: @@
 '''Templates''' tool property page opens below.
 |-
-|| Click on '''Amino Acids'''.
+||Click on '''Amino Acids'''.
 Select '''Alanine''' from the list.
@@ Line 70: / Line 70: @@
 Structure of '''Alanine''' is loaded onto the '''Templates''' property page.
 |-