GChemPaint/C2/Edit-Preferences-Templates-and-Residues/English - Revision history

Madhurig at 12:04, 18 December 2013

2013-12-18T12:04:38Z

Madhurig at 07:32, 19 June 2013

2013-06-19T07:32:53Z

Madhurig at 07:26, 19 June 2013

2013-06-19T07:26:26Z

Madhurig at 06:55, 19 June 2013

2013-06-19T06:55:10Z

Madhurig at 06:48, 19 June 2013

2013-06-19T06:48:17Z

Madhurig at 05:47, 19 June 2013

2013-06-19T05:47:08Z

Madhurig at 05:25, 10 June 2013

2013-06-10T05:25:37Z

Madhurig at 05:11, 10 June 2013

2013-06-10T05:11:26Z

Madhurig at 07:56, 6 June 2013

2013-06-06T07:56:51Z

Madhurig at 07:12, 17 May 2013

2013-05-17T07:12:35Z

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← Older revision		Revision as of 12:04, 18 December 2013
Line 1:		Line 1:
		+	Title of the tutorial: Edit-Preferences-Templates-and-Residues
		+
		+	Author: Madhuri Ganapathi
		+
		+	Key words: Edit Preferences, Manage Templates, Add New Templates, Residues, edit Residues,Video tutorial.
		+
		+	GChemPaint tools- Add an arrow for an irreversible reaction, Add a pair of Arrows for a reversible reaction, Add an arrow for a retrosynthesis step, Add a double headed arrow to represent mesomery.
		+
	{\|border =1		{\|border =1
	!Visual Cue		!Visual Cue

@@ Line 271: / Line 271: @@
 |-
 ||Select '''n-Pr''' from the list.
-||Select n-Pr for from the list.
+||Select '''n-Pr''' for from the list.
 |-
 ||Point to the '''Identity''' tab
@@ Line 361: / Line 361: @@
 ||Watch the video available at this URL.
-'''http://spoken-tutorial.org/What is a Spoken Tutorial'''
+'''http://spoken-tutorial.org/What_is_a_Spoken_Tutorial'''
 It summarises the Spoken Tutorial project

@@ Line 118: / Line 118: @@
 |-
 ||Point  A, B and C
-||The default values of A, B and C are displaced here.
+||The default values of A, B and C are displayed here.
 |-

@@ Line 196: / Line 196: @@
 ||Select the file named “Hexane”  from the list.
-Then, click on '''Open''' button.
+Click on '''Open''' button.
 |-
 ||Click on '''Add''' button>>'''New template''' property page opens.
@@ Line 270: / Line 270: @@
 ||'''New''' button  has a drop down list.
 |-
-||Select '''n-Pr''' for propyl
+||Select '''n-Pr''' from the list.
-||Select n-Pr for propyl.
+||Select n-Pr for from the list.
 |-
 ||Point to the '''Identity''' tab
@@ Line 296: / Line 296: @@
 Name it as '''Hydroxy'''.
 |-
-||Click on '''Formula''' tab.
+||Click on the '''Formula''' tab.
-||Click on '''Formula''' tab.
+||Click on the '''Formula''' tab.
 You will see a bulleted bond.
@@ Line 306: / Line 306: @@
 ||Place the cursor near the bond and press capital '''O'''.
-A '''Submenu''' with '''O''' and '''Os''' opens.
+A '''Submenu''' opens with '''O''' and '''Os'''.
 |-
 ||Select '''O'''

@@ Line 186: / Line 186: @@
 |-
 ||
-||Let's now learn to add a '''New template''' to the existing Template list.
+||Now let's learn to add a '''New template''' to the existing Template list.
 |-
 ||Click on '''Open a file''' icon from the toolbar

@@ Line 8: / Line 8: @@
 ||Hello everyone.
-Welcome the tutorial on '''Edit Preferences, Templates''' and '''Residues''' in '''GChemPaint'''.
+Welcome to the tutorial on '''Edit Preferences, Templates''' and '''Residues''' in '''GChemPaint'''.
 |-
 ||
@@ Line 27: / Line 27: @@
 We will also learn
-* The uses of Residues
+* The uses of Residues and
 * To edit Residues.
@@ Line 50: / Line 50: @@
 |-
 ||Switch to '''GChemPaint''' application.
-||I have opened a new '''GChemPaint''' application.
+||I have already opened a new '''GChemPaint''' application.
 |-
 ||
@@ Line 61: / Line 61: @@
 |-
 ||Point to  the field
-||The first field, '''Default Compression Level For  GChemPaint Files''', is used when saving files.
+||The first field, '''Default Compression Level For GChemPaint Files''', is used when saving files.
 By default, it is zero.
@@ Line 72: / Line 72: @@
 |-
 ||Point to '''Default Theme''' >> then click on the drop-down to show the options
-||In''' GchemPaint,''' each document has an associated theme.
+||In ''' GchemPaint,''' each document has an associated theme.
-Let's retain the '''Default Theme''' as''' GChemPaint.'''
+Let's retain the '''Default Theme''' as ''' GChemPaint.'''
 |-
 ||Point to ''' Arrows'''
-||Now, I will explain about''' Arrows'''  in detail, under '''Themes''' section.
+||Now, I will explain about ''' Arrows'''  in detail, under '''Themes''' section.
 |-
 ||Point to the arrows
@@ Line 86: / Line 86: @@
 * Add a pair of Arrows for a reversible reaction.
-* Add an arrow for a retrosynthetic step.
+* Add an arrow for a retrosynthesis step.
 * Add a double headed arrow to represent mesomery.
@@ Line 112: / Line 112: @@
 ||Click on up or down arrow triangles with the mouse.
-Observe the changes on the arrows in the '''Display area.'''
+And Observe the changes in the arrows in the '''Display area.'''
 |-
 ||
-||Next let's learn about Arrow heads.
+||Now let's learn about Arrow heads.
 |-
 ||Point  A, B and C
@@ Line 166: / Line 166: @@
 |-
 ||Select and click '''Naphtalene''' structure
-||Likewise let's select '''Naphtalene''' structure and click on  '''Display area.'''
+||Likewise let's select '''Naphtalene''' structure and click on the '''Display area.'''
 |-
 ||'''Slide Number 5
@@ Line 180: / Line 180: @@
 ||'''Save as''' dialog box opens.
-Enter the file name as '''Benzene''' and click on '''Save''' button.
+Enter the file name as '''Benzene'''  click on '''Save''' button.
 ||'''Save as''' dialog box opens
-Enter the file name as '''Benzene''' and click on '''Save''' button.
+Enter the file name as '''Benzene'''  click on '''Save''' button.
 |-
 ||
@@ Line 193: / Line 193: @@
 A window with files and folders opens.
 |-
-||select “Hexane” >> click on '''Ope'''n button.
+||select “Hexane” >> click on '''Open''' button.
 ||Select the file named “Hexane”  from the list.
@@ Line 221: / Line 221: @@
 |-
 ||Click on '''Ok''' button.
-||It will  be displayed on the '''New template''' property page.
+||It will be displayed on the '''New template''' property page.
 Click on '''Ok''' button.
@@ Line 231: / Line 231: @@
 Observe that '''Hexane''' structure is added to the '''Template''' list.
 |-
 ||'''Slide Number 6
@@ Line 241: / Line 236: @@
 Assignment'''
 ||Add '''Octane''' structure to '''Hydrocarbons''' category, on your own.
 |-
 ||Click on '''Select one or more objects''' tool >> Close '''Templates''' property page.
@@ Line 246: / Line 246: @@
 |-
 ||
-||Next, let's learn about '''Residues.'''
+||Now, let's learn about '''Residues.'''
 |-
 ||'''Slide Number 7
@@ Line 260: / Line 260: @@
 |-
 ||Go to '''Tools''' menu>>Click on '''Edit residues.'''
-||Go to '''Tools''' menu and click on '''Edit residues.'''
+||Go to '''Tools''' menu  click on '''Edit residues.'''
 '''Residues''' window opens.
 |-
 ||Point to the  buttons
-||It has three buttons - '''New, Save, Delete.'''
+||It has three buttons - '''New, Save''' and '''Delete.'''
 |-
 ||Point to the list
 ||'''New''' button  has a drop down list.
 |-
 ||Select '''n-Pr''' for propyl
@@ Line 283: / Line 282: @@
 ||Likewise, let's select  '''s-Bu''' for Secondary Butyl.
-Observe the '''Symbol, Name''' and '''Skeletal''' structure of the residue.
+Observe the '''Symbol, Name''' and '''Skeletal''' structure of the  selected residue.
 |-
 ||
@@ Line 319: / Line 318: @@
 ||Click on the list .
 ||
-Now, click on the '''New''' button to view the list.
+Now, click on  '''New''' button to view the list.
-Observe that  '''O-H''' residue is now added to the list.
+Observe that  '''O-H''' residue is added to the list.
 |-
 ||Click on '''Close''' button to close the window
@@ Line 340: / Line 339: @@
 * Manage Templates
-* Select and use ready Templates and
+* Select and use ready Templates
 * Add a New Template

@@ Line 173: / Line 173: @@
 ||Select and place other structures on the '''Display area''', on your own.
 |-
-||Click on Save a current file icon on the toolbar
+||Click on '''Save a current file''' icon on the toolbar
 ||Let's save the file now.
-Click on Save the current file icon on the toolbar.
+Click on '''Save the current file''' icon on the toolbar.
 |-
 ||'''Save as''' dialog box opens.
@@ Line 203: / Line 203: @@
 '''New template''' property page opens.
 |-
-||
+||Point to the fields.
 ||Property page has two fields – '''Name''' and '''Category.'''
 |-
@@ Line 230: / Line 230: @@
 Select '''Hydrocarbons''' category.
-Observe that '''Hexane''' structure is added to the '''Templates''' list.
+Observe that '''Hexane''' structure is added to the '''Template''' list.
 |-
 ||Go to '''File''' menu>> select '''Close''' to close the file.
@@ Line 278: / Line 278: @@
 |-
 ||Point to the '''Formula''' tab
-||'''Formula''' tab shows the skeletal structure of the selected residue.
+||'''Formula''' tab shows the Skeletal structure of the selected residue.
 |-
 ||Point to Symbol, Name and skeletal structure
@@ Line 294: / Line 294: @@
 Name it as '''Hydroxy.'''
-||In the '''Symbo'''l field type ''' O-H.'''
+||In the '''Symbol''' field type ''' O-H.'''
 Name it as '''Hydroxy'''.
 |-
 ||Click on '''Formula''' tab.
 ||Click on '''Formula''' tab.
 You will see a bulleted bond.
 |-
 ||Place the cursor near the bond >> press capital '''O'''.
 Point to '''Submenu.'''
 ||Place the cursor near the bond and press capital '''O'''.
@@ Line 317: / Line 319: @@
 ||Click on the list .
 ||
-Now, click on the New button to view the list.
+Now, click on the '''New''' button to view the list.
 Observe that  '''O-H''' residue is now added to the list.
@@ Line 341: / Line 343: @@
 * Add a New Template
 * Uses of Residues and

@@ Line 19: / Line 19: @@
 * Edit Preferences
 * Manage Templates
-* Select and use ready Templates and
+* Select and use ready Templates
 * Add a New Template
 We will also learn
-* The uses of Residues and
+* The uses of Residues
 * To edit Residues.
 |-
@@ Line 52: / Line 52: @@
 |-
 ||Go to '''Edit''' menu>> navigate to '''Preferences'''>> click on it.
-||Go to '''Edit''' menu, navigate to Preferences and click on it.
+||Go to '''Edit''' menu, navigate to '''Preferences''' and click on it.
 '''GChemPaint Preferences''' window opens.
@@ Line 78: / Line 78: @@
 ||Observe the different types of  arrows on the tool box
-* Add an arrow for an irreversible reaction
+* Add an arrow for an irreversible reaction.
 * Add a pair of Arrows for a reversible reaction.
-* Add an arrow for retrosynthetic step
+* Add an arrow for a retrosynthetic step.
-* Add a double headed arrow to represent mesomery
+* Add a double headed arrow to represent mesomery.
 |-
 ||
@@ Line 96: / Line 96: @@
 ||Add arrows to '''Display area'''
 ||Likewise I will add  other types of arrows to the Display area.
 |-
 || Select '''Arrows''' from '''Themes''' >>A '''contextual''' menu opens
-||Select '''Arrows''' from '''Themes''' field in the '''Preferences''' dialog box.
+||Select '''Arrows''' from the '''Themes''' field in the '''Preferences''' dialog box.
 A '''Contextual''' menu opens.
@@ Line 116: / Line 113: @@
 ||Next let's learn about Arrow heads.
 |-
-||
+||Point  A, B and C
-||The default values of A,B and C are displaced here.
+||The default values of A, B and C are displaced here.
 |-
@@ Line 124: / Line 121: @@
 |-
-||Increase and then decrease A, B and C.
+||Increase or decrease A, B and C.
 ||Increase or decrease each one and observe the changes in the arrow heads.
-Click on '''Close''' button to  close the window
+let's Click on '''Close''' button to close the window
 |-
 ||Press '''CTRL +A''' to select all objects>> Go to '''Edit''' menu,  click on '''Clear'''.
@@ Line 150: / Line 147: @@
 |-
 ||Point to the list.
-||List contains '''Amino acids, Aromatic hydrocarbons,  Nucleic bases,''' '''Nucleosides''' and '''Saccharides.'''
+||List contains '''Amino acids, Aromatic hydrocarbons, Nucleic bases,''' '''Nucleosides''' and '''Saccharides.'''
 |-
 ||Point to the ''' Submenu'''
@@ Line 156: / Line 153: @@
 |-
 ||Select '''Aromatic Hydrocarbons''' >>click on '''Benzene''' from the '''Submenu'''.
-||
+||Let's select '''Aromatic Hydrocarbons''' and click on '''Benzene''' from the '''Submenu.'''
 Let's select '''Aromatic Hydrocarbons''' and click on '''Benzene''' from the '''Submenu.'''
 |-
 ||Point to '''Benzene''' structure
@@ Line 163: / Line 159: @@
 |-
 ||Drag and drop '''Benzene'''   structure to the '''Display area.'''
-||Now let's click on the '''Display area.'''
+||Now  click on the '''Display area''' to display '''Benzene''' structure.
 |-
 ||Select and click '''Naphtalene''' structure
-||Likewise let's select '''Naphtalene''' structure and click on the '''Display area.'''
+||Likewise let's select '''Naphtalene''' structure and click on  '''Display area.'''
 |-
 ||'''Slide Number 5
@@ Line 173: / Line 169: @@
 ||Select and place other structures on the '''Display area''', on your own.
 |-
-||Press '''CTRL +Z'''
+||Click on Save a current file icon on the toolbar
-||Let's undo the changes.
+||Let's save the file now.
-Press '''CTRL +Z''' to undo.
+Click on Save the current file icon on the toolbar.
 |-
-||
+||'''Save as''' dialog box opens. Enter the file name as '''Benzene''' and click on '''Save''' button.
-||Let's now learn to add a New template to the existing Template list.
+||'''Save as''' dialog box opens
 |-
 ||
-Click on '''Open a file''' icon from the toolbar.
+||Let's now learn to add a '''New template''' to the existing Template list.
 A window with files and folders opens.
@@ Line 192: / Line 191: @@
 |-
 ||Click on '''Add''' button>>'''New template''' property page opens.
-||Click on '''Add''' button.
+||Click on '''Add''' button on the template's property page.
 '''
-New template''' property page opens.
+'''New template''' property page opens.
 |-
 ||
@@ Line 213: / Line 212: @@
 ||Click on the '''Hexane''' structure on the '''Display area.'''
 |-
-||
+||Click on '''Ok''' button.
 Click on '''Ok''' button.
 ||It will  be displayed on the '''New template''' property page.
@@ Line 221: / Line 219: @@
 ||Click on '''Templates''' drop-down.
 ||Now, click on '''Templates''' drop-down.
 Observe that '''Hexane''' structure is added to the '''Templates''' list.
 |-
 ||'''Slide Number 6
@@ Line 229: / Line 233: @@
 ||Add '''Octane''' structure to '''Hydrocarbons''' category, on your own.
 |-
-||Go to '''File''' menu>> select '''Close''' to close the file.
-||Let's  close the “hexane” file.
-Go to '''File''' menu, select '''Close''' to close the file.
-|-
 ||Click on '''Select one or more objects''' tool >> Close '''Templates''' property page.
 ||Click on '''Select one or more objects''' tool  to close the '''Templates''' property page.