Nancyvarkey at 05:27, 16 June 2015

2015-06-16T05:27:50Z

Bellatony911: Created page with " {| style="border-spacing:0;" | style="border:0.05pt solid #000000;padding:0.053cm;"| '''Visual Cue''' | style="border:0.05pt solid #000000;padding:0.053cm;"|..."

2015-06-10T13:28:16Z

Created page with " {| style="border-spacing:0;" | style="border:0.05pt solid #000000;padding:0.053cm;"| <center>'''Visual Cue'''</center> | style="border:0.05pt solid #000000;padding:0.053cm;"|..."

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{| style="border-spacing:0;"
| style="border:0.05pt solid #000000;padding:0.053cm;"| <center>'''Visual Cue'''</center>
| style="border:0.05pt solid #000000;padding:0.053cm;"| <center>'''Narration'''</center>

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| '''Slide Number 1'''

'''Title '''
| style="border:0.05pt solid #000000;padding:0.053cm;"| Hello everyone.

Welcome to this tutorial on '''Installation of CellDesigner on Linux OS'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| '''Slide Number 2'''

'''Learning Objectives'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| In this tutorial we will learn to

* Download and install '''CellDesigner 4.3 '''on''' Ubuntu Linux Operating System'''
* and create a''' Compartment on the draw area.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| '''Slide Number 3'''

'''System Requirement'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| Here I am using

* '''Ubuntu Linux OS version 14.04'''
* '''CellDesigner version 4.3'''
* '''Java version 1.7'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| '''Slide Number 4'''

'''Pre-requisites'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| To follow this tutorial, you should be familiar with basic operations on '''Linux''' '''OS.'''

If not, for relevant '''Linux tutorials''', please visit our website '''www.spoken-tutorial.org'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Go to this URL [http://celldesigner.org/features/features43.html http://celldesigner.org/features/features43.html]
| style="border:0.05pt solid #000000;padding:0.053cm;"| To install '''CellDesigner''', open your web browser and go to the '''URL '''as shown.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''Download''' '''CellDesigner''' button

[http://celldesigner.org/features/features43.html http://celldesigner.org/features/features43.html]

| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''Download''' '''CellDesigner''' button at the top right hand side.

A new web-page opens.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Scroll down >> locate '''Download'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| Scroll down and locate '''Download'''.

It shows '''Download for Linux 64 bit '''and '''Download for Linux 32 bit.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| Now, let us see how to find out the details of the '''OS type '''of our machine.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on ''''System Settings'''',
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on the icon ''''System Settings'''', located at the top right corner of your machine.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Under ''''System' >> '''click on ‘'''Details'.'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| Under the panel ''''System', '''double click on the icon ''''Details''''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Highlight OS type field
| style="border:0.05pt solid #000000;padding:0.053cm;"| A window named ''''Details'''' opens.

Here check the ‘'''OS type'''’ - whether it is '''32-bit '''or '''64-bit.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Highlight OS type field

Close the window
| style="border:0.05pt solid #000000;padding:0.053cm;"| I have a '''64 bit''' machine.  

Now, let us close this window and go back to the browser.

|-
| style="background-color:#e6b8af;border:0.05pt solid #000000;padding:0.053cm;"| Point to 32 '''bit version'''
| style="background-color:#e6b8af;border:0.05pt solid #000000;padding:0.053cm;"| In case you have a 32 bit machine, then download the '''32''' '''bit version. '''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''Download for Linux 64bit.'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| I will click on '''Download for Linux 64 bit '''link.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| Immediately, a new window opens up.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''First Time User '''>> click on '''Continue'''.

| style="border:0.05pt solid #000000;padding:0.053cm;"| Since I am a new user, I will click on '''First Time User '''option.

Then click on '''Continue'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| Now, we are prompted to fill up some personal details.

|-
| style="background-color:#00ffff;border:0.05pt solid #000000;padding:0.053cm;"| Pause recording and fill the details.

Resume the recording.
| style="border:0.05pt solid #000000;padding:0.053cm;"|

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| After filling these, click on '''Download '''button.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''Save File''' button
| style="border:0.05pt solid #000000;padding:0.053cm;"| A dialog box opens.  

Here click on '''Save File''' button.

Click on ok button.

This may take some time depending on the Internet speed.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Press '''Ctrl+Alt+T '''keys
| style="border:0.05pt solid #000000;padding:0.053cm;"| Once the file is downloaded, go to the '''terminal''' by pressing '''Ctrl+Alt+T '''keys'''.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type '''cd Downloads '''>> press '''Enter.'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| I have already downloaded the file in my default '''Downloads '''folder.

So, first I will go to that folder. Type-

'''cd Downloads '''and press '''Enter.'''

Now type '''ls '''and press '''Enter.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| Here is the file which we downloaded

'''CellDesigner-4.3-linux-x64-installer.run'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| '''Text on screen during editing'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| If you downloaded '''32 bit '''installer, then the file name will have '''32''' instead of '''64.'''

Remember to use the filename of your '''32 bit installer '''in the terminal commands from here on.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type '''sudo chmod 777 -R CellDesigner-4.3-linux-x64-installer.run'''

>> press '''Enter'''.       
| style="border:0.05pt solid #000000;padding:0.053cm;"| Now, we have to change the file permission.

So, type

'''sudo chmod 777 -R CellDesigner-4.3-linux-x64 -installer.run'''

and press '''Enter'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type '''admin''' password
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type the '''admin''' password when prompted and press '''Enter.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type '''./CellDesigner-4.3-linux-x64-installer.run '''>> press '''Enter'''.
| style="border:0.05pt solid #000000;padding:0.053cm;"| Now we will run the file by typing

'''./CellDesigner-4.3-linux-x64-installer.run '''

and press '''Enter'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| The '''Setup wizard''' dialog box opens up.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''Next'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''Next '''button.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click '''I''' '''agree >> '''click on '''Next'''.
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on the '''I accept the agreement '''option and then click on '''Next'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Point to the directory >> click on '''Next.'''

| style="border:0.05pt solid #000000;padding:0.053cm;"| '''Installation Directory '''dialog shows the directory where '''CellDesigner '''will be installed.

It will be displayed as

'''<nowiki>/home/<your username>/CellDesigner4.3</nowiki>'''

Now, click on '''Next.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Point to '''Ready to Install '''>> click on '''Next.'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| It says '''Ready to Install'''.

Again, click on '''Next.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''Finish''' button.
| style="border:0.05pt solid #000000;padding:0.053cm;"| The installation will begin.

Once completed, uncheck the ‘View Read me’ File and click on '''Finish''' button.

<nowiki><<PAUSE>></nowiki>

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Open a new '''terminal'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| Now, open a new '''terminal '''by pressing '''Ctrl + Alt + T '''keys.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type '''ls''' >> press '''Enter'''.
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type '''ls''' and press '''Enter'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Point to '''runCellDesigner4.3 '''file

| style="border:0.05pt solid #000000;padding:0.053cm;"| We can see '''runCellDesigner4.3 '''file here.

We have to execute this file to open '''CellDesigner'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type '''./runCellDesigner4.3''' >> press '''Enter'''.
| style="border:0.05pt solid #000000;padding:0.053cm;"| So type '''./runCellDesigner4.3''' and press '''Enter'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| '''CellDesigner''' window is now open in our '''Linux''' machine.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Point to the '''Main Menu bar area'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| Notice that we are unable to see the '''Main menu''' bar clearly.

To make it visible, we have to change the '''system settings.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on ''''System Settings'''',
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on the icon ''''System Settings'''', located on top right corner of the Computer.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Under ''''Personal' >> '''click on ‘'''Appearance'.'''

| style="border:0.05pt solid #000000;padding:0.053cm;"| Under the panel ''''Personal', '''double click on the icon ''''Appearance'.'''

A window named ''''Appearance'''' opens. Here, select the tab ''''Look''''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| From the drop-down menu in the ''''Theme'''' box >> select ''''Radiance'''' >> close the window.

| style="border:0.05pt solid #000000;padding:0.053cm;"| From the drop-down menu in the ''''Theme'''' box select ''''Radiance'''' and close the window.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| Notice that the '''Main menu''' bar is now clearly visible.

Let’s proceed.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''File >> New'''

Click on '''New''' icon in the menu bar.

| style="border:0.05pt solid #000000;padding:0.053cm;"| To open a new document click on '''File''' and then on '''New.'''

Alternately, click on the '''New''' icon in the menu bar.

Or, press '''Ctrl + N''' keys'''.'''

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type the filename as ''''Create and Edit''''.
| style="border:0.05pt solid #000000;padding:0.053cm;"| A dialog box '''New Document''' appears on the screen, prompting us to name the file.

Type the filename as ''''Create and Edit''''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Type 900 for Width ,  800 for height >> click Ok
| style="border:0.05pt solid #000000;padding:0.053cm;"| Set the '''Width''' to 900, '''Height''' to 800 and click on the '''Ok''' button at the bottom.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click '''Ok'''.

| style="border:0.05pt solid #000000;padding:0.053cm;"| An 'Information' box opens and all spaces in the name that we gave, changes to '''underscore'''.

So, the actual name of our file will be ''''Create_and_Edit''''.

Click ''''Ok'''' and proceed.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Point to the draw area.
| style="border:0.05pt solid #000000;padding:0.053cm;"| The white area in the centre is what we call the draw area.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Point to the menu bars and toolbars.
| style="border:0.05pt solid #000000;padding:0.053cm;"| We will learn about the menu bars, toolbars and various panels in detail in the coming tutorials.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| Hover the mouse on '''Select Mode''' in the tool bar >> Click.

| style="border:0.05pt solid #000000;padding:0.079cm;"| Before selecting any other icon from the toolbar, click on the '''Select Mode''' icon.

This acts as a selection tool.

With this selection tool, we can select, draw and move the components on the draw area.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"|
| style="border:0.05pt solid #000000;padding:0.079cm;"| Before we draw a component, we will ensure that '''Grid Snap''' and '''Grid Visible''' are enabled in '''CellDesigner.'''

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| Click on '''Edit''' in the main menu bar.

Scroll down and click on '''Grid Snap'''.
| style="border:0.05pt solid #000000;padding:0.079cm;"| Click on '''Edit''' in the main menu bar.

Scroll down and click on '''Grid Snap.'''

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| Click on '''Edit''' >> Scroll down and click on '''Grid Visible'''.
| style="border:0.05pt solid #000000;padding:0.079cm;"| Go back to '''Edit''' again and click on '''Grid Visible.'''

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"|
| style="border:0.05pt solid #000000;padding:0.079cm;"| '''Grids''' enable us to better align the components in the draw area.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"|
| style="border:0.05pt solid #000000;padding:0.079cm;"| Now let us change the position of the '''List '''& '''Notes''' area.

Recall, we already learnt about List area, Notes area and Draw area in the previous tutorial.

If you do not know, refer to the previous tutorials in this series.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"|
| style="border:0.05pt solid #000000;padding:0.079cm;"| Let's proceed and change the location of the List area.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| Go to View >> Click on List and Select Right

| style="border:0.05pt solid #000000;padding:0.079cm;"| Go to '''View''' option, click on '''List '''and select the option ‘'''Right’'''.

It changes ‘'''List’''' to the right side of the draw area.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| Change the size and position of the areas.

Place the cursor on borderline of draw area and drag.
| style="border:0.05pt solid #000000;padding:0.079cm;"| The size of the areas can be altered by

dragging the borderlines.

I will place the cursor on the borderline .

You can see a double headed arrow. Drag it to maximize or minimize the area.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"|
| style="border:0.05pt solid #000000;padding:0.079cm;"| We will now proceed to work on the draw area.

|-
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"|
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| Before that, we should be able to view all the icons on the menu bar of the '''CellDesigne'''r window.

|-
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| Cursor on '''View '''on the main menu bar toolbar>> C'''hange Toolbar Visible'''>>'''Show All'''
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| Go to '''View '''on the main menu bar, scroll down and select '''Change Toolbar Visible'''

Now select the option''' Show All'''

|-
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"|
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| Observe, you are now able to see all the icons on the '''CellDesigner''' window

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| Cursor on the toolbar >> Point towards square icon >> and then click on it
| style="border:0.05pt solid #000000;padding:0.079cm;"| To represent a cell or an intracellular compartment, we will use the '''Square''' icon from the toolbar.

So, first click on it.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| Click on the ''''Square'''' icon>> Click and drag on the draw area.
| style="border:0.05pt solid #000000;padding:0.079cm;"| Then click on the draw area and without releasing the mouse button, drag to draw the square.

Now release the mouse button.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| In the dialog box type '''Cell''' and and '''Size''' as 1.0 >> Click Ok
| style="border:0.05pt solid #000000;padding:0.079cm;"| In the ''''Property of Compartment'''' dialog that opens, specify '''Name''' as '''Cell''' and '''Size''' as 1.0

Click '''Ok.'''

The name '''Cell''' appears at the bottom of the compartment.

|-
| style="border:0.05pt solid #000000;padding:0.079cm;"| Cursor on Name of the Compartment.

Drag and drop it wherever required.
| style="border:0.05pt solid #000000;padding:0.079cm;"| One can change the position of the compartment name, too.

To do so, select the compartment name, which is '''Cell''', in our case.

Now, drag and drop it wherever you want to place it.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on File >> Save.

| style="border:0.05pt solid #000000;padding:0.053cm;"| Let us save this file by clicking on '''File''' and then on '''Save As'''
option.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Choose '''Desktop '''>> click on '''Ok '''button
| style="border:0.05pt solid #000000;padding:0.053cm;"| Now choose the folder where you want to save your file.

I wish to save it on the '''Desktop'''. So, I will double click on '''Desktop '''as the folder in which I want to save.

And then click on '''Ok '''button at the bottom right.

Once again, Click on the '''OK''' button on the bottom right side.

Our file is now saved.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Click on '''File '''>> '''Exit'''
| style="border:0.05pt solid #000000;padding:0.053cm;"| To close '''CellDesigner''', click on '''File '''and then on '''Exit'''.

|-
| style="background-color:#f4cccc;border:0.05pt solid #000000;padding:0.053cm;"| Close both the terminal windows
| style="background-color:#f4cccc;border:0.05pt solid #000000;padding:0.053cm;"| We will now close the terminal windows which we had opened earlier.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Go to the '''Desktop''' >> Point to the file

| style="border:0.05pt solid #000000;padding:0.053cm;"| Let us now go to the folder where we saved our file. So, I will go to my '''Desktop'''.

Here is my file.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Point to the file
| style="border:0.05pt solid #000000;padding:0.053cm;"| Notice that the file is saved in '''.xml '''format.

This is the default '''CellDesigner '''file format.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Point to the file
| style="border:0.05pt solid #000000;padding:0.053cm;"| Also note, that this file can only be opened in '''CellDesigner'''.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"| Summary
| style="border:0.05pt solid #000000;padding:0.053cm;"| Let us summarize

In this tutorial, we learnt to:

* Install '''CellDesigner '''on '''Ubuntu Linux OS '''
* Create a '''Compartment''' on the draw area

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| This video summarizes the Spoken Tutorial project

If you do not have good bandwidth, you can download and watch it.

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| '''Spoken Tutorial team conducts workshops using Spoken Tutorials and gives certificates. '''

Please contact us.

'''contact@spoken-tutorial.org'''

|-
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.053cm;"|
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.053cm;"| The Spoken Tutorial Project is funded by '''NMEICT, MHRD Government of India'''.

|-
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.053cm;"|
| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.053cm;"| More information on this Mission is available at this link.

[http://spoken-tutorial.org/NMEICT-Intro http://spoken-tutorial.or][http://spoken-tutorial.org/NMEICT-Intro g][http://spoken-tutorial.org/NMEICT-Intro /NMEICT-Intro]

|-
| style="border:0.05pt solid #000000;padding:0.053cm;"|
| style="border:0.05pt solid #000000;padding:0.053cm;"| This is Bella Tony from '''IIT Bombay''' signing off. Thank you for joining.

|}

@@ Line 429: / Line 429: @@
 |-
 | style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| Cursor on '''View '''on the main menu bar toolbar>> C'''hange Toolbar Visible'''>>'''Show All'''
-| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| For that, go to '''View '''on the main menu bar, click on '''Change Toolbar Visible''' and select the ''' Show All''' option.
+| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| For that, go to '''View '''on the main menu bar.
 |-
 | style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"|
-| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| You are now able to see all the icons on the '''CellDesigner''' window.  Let's go ahead.
+| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.079cm;"| You are now able to see all the icons on the '''CellDesigner''' window.
 |-
@@ Line 454: / Line 459: @@
 |-
 | style="border:0.05pt solid #000000;padding:0.079cm;"| In the dialog box type '''Cell''' and and '''Size''' as 1.0 >> Click Ok
-| style="border:0.05pt solid #000000;padding:0.079cm;"| In the ''''Property of Compartment'''' dialog that opens, specify '''Name''' as '''Cell''' and set the '''Size''' as 1.0
+| style="border:0.05pt solid #000000;padding:0.079cm;"| In the ''''Property of Compartment'''' dialog that opens, specify
@@ Line 479: / Line 486: @@
-| style="border:0.05pt solid #000000;padding:0.053cm;"| Let us save this file by clicking on '''File''' and then on '''Save As'''
+| style="border:0.05pt solid #000000;padding:0.053cm;"| Let us save this file by clicking on '''File''' and then on '''Save As''' option.
 option.
 |-
@@ Line 495: / Line 501: @@
-Once again, click on the '''OK''' button on the bottom right.
+Once again, click on the '''OK''' button at the bottom right.
 Our file is now saved.
@@ Line 551: / Line 557: @@
 | style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.053cm;"| Spoken Tutorial Project is funded by '''NMEICT, MHRD Government of India'''.
-|-
-| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.053cm;"|
+Information on this Mission is available on this link.
-| style="border-top:none;border-bottom:0.05pt solid #000000;border-left:0.05pt solid #000000;border-right:0.05pt solid #000000;padding:0.053cm;"|Information on this Mission is available on this link.
 |-
 | style="border:0.05pt solid #000000;padding:0.053cm;"|
-| style="border:0.05pt solid #000000;padding:0.053cm;"| This is Bella Tony from '''IIT Bombay''' signing off. Thank you for joining.
+| style="border:0.05pt solid #000000;padding:0.053cm;"| This is Bella Tony from '''IIT Bombay''' signing off. Thanks for watching.
 |}

CellDesigner/C2/Installation-of-CellDesigner-on-Linux/English - Revision history

Nancyvarkey at 05:27, 16 June 2015

Nancyvarkey at 06:56, 12 June 2015

Bellatony911: Created page with " {| style="border-spacing:0;" | style="border:0.05pt solid #000000;padding:0.053cm;"| '''Visual Cue''' | style="border:0.05pt solid #000000;padding:0.053cm;"|..."